U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NFASC neurofascin [ Elephantulus edwardii (Cape elephant shrew) ]

Gene ID: 102864995, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
NFASC
Gene description
neurofascin
Gene type
protein coding
RefSeq status
MODEL
Organism
Elephantulus edwardii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
33
Annotation release Status Assembly Chr Location
100 current EleEdw1.0 (GCF_000299155.1) Unplaced Scaffold NW_006399813.1 (3590199..3862652)

NW_006399813.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat neuronal 2 Neighboring gene ATP synthase subunit delta, mitochondrial-like Neighboring gene contactin 2 Neighboring gene transmembrane protein 81 Neighboring gene RB binding protein 5, histone lysine methyltransferase complex subunit

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006399813 unplaced scaffold reference EleEdw1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell-cell adhesion mediator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
neurofascin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Elephantulus edwardii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EleEdw1.0

Genomic

  1. NW_006399813.1 Reference EleEdw1.0

    Range
    3590199..3862652
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006887905.1 → XP_006887967.1  neurofascin

    Conserved Domains (9) summary
    cd05731
    Location:363 → 433
    Ig3_L1-CAM_like; Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)
    cd05875
    Location:158 → 234
    Ig6_hNeurofascin_like; Sixth immunoglobulin (Ig)-like domain of human neurofascin (NF)
    smart00408
    Location:548 → 607
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:353 → 432
    IG_like; Immunoglobulin like
    cd00063
    Location:727 → 817
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:627 → 708
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:1114 → 1185
    fn3; Fibronectin type III domain
    pfam13882
    Location:1231 → 1315
    Bravo_FIGEY; Bravo-like intracellular region
    cl11960
    Location:239 → 331
    Ig; Immunoglobulin domain

  2. XM_006887909.1 → XP_006887971.1  neurofascin

    Conserved Domains (6) summary
    cd05731
    Location:357 → 427
    Ig3_L1-CAM_like; Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)
    cd05875
    Location:152 → 228
    Ig6_hNeurofascin_like; Sixth immunoglobulin (Ig)-like domain of human neurofascin (NF)
    smart00408
    Location:542 → 601
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:347 → 426
    IG_like; Immunoglobulin like
    pfam07679
    Location:621 → 702
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:233 → 325
    Ig; Immunoglobulin domain

  3. XM_006887908.1 → XP_006887970.1  neurofascin

    Conserved Domains (8) summary
    cd05731
    Location:275 → 345
    Ig3_L1-CAM_like; Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)
    cd05875
    Location:53 → 129
    Ig6_hNeurofascin_like; Sixth immunoglobulin (Ig)-like domain of human neurofascin (NF)
    smart00408
    Location:460 → 519
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:265 → 344
    IG_like; Immunoglobulin like
    cd00063
    Location:624 → 714
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:539 → 620
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:1061 → 1145
    Bravo_FIGEY; Bravo-like intracellular region
    cl11960
    Location:134 → 226
    Ig; Immunoglobulin domain

  4. XM_006887906.1 → XP_006887968.1  neurofascin

    Conserved Domains (8) summary
    cd05731
    Location:275 → 345
    Ig3_L1-CAM_like; Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)
    cd05875
    Location:53 → 129
    Ig6_hNeurofascin_like; Sixth immunoglobulin (Ig)-like domain of human neurofascin (NF)
    smart00408
    Location:460 → 519
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:265 → 344
    IG_like; Immunoglobulin like
    cd00063
    Location:639 → 729
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:539 → 620
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:1081 → 1165
    Bravo_FIGEY; Bravo-like intracellular region
    cl11960
    Location:134 → 226
    Ig; Immunoglobulin domain

  5. XM_006887907.1 → XP_006887969.1  neurofascin

    Conserved Domains (8) summary
    cd05731
    Location:275 → 345
    Ig3_L1-CAM_like; Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)
    cd05875
    Location:53 → 129
    Ig6_hNeurofascin_like; Sixth immunoglobulin (Ig)-like domain of human neurofascin (NF)
    smart00408
    Location:460 → 519
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:265 → 344
    IG_like; Immunoglobulin like
    cd00063
    Location:624 → 714
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:539 → 620
    I-set; Immunoglobulin I-set domain
    pfam13882
    Location:1066 → 1150
    Bravo_FIGEY; Bravo-like intracellular region
    cl11960
    Location:134 → 226
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.