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MDN1 midasin AAA ATPase 1 [ Elephantulus edwardii (Cape elephant shrew) ]

Gene ID: 102859754, updated on 10-Mar-2024

Summary

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Gene symbol
MDN1
Gene description
midasin AAA ATPase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Elephantulus edwardii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
103
Annotation release Status Assembly Chr Location
100 current EleEdw1.0 (GCF_000299155.1) Unplaced Scaffold NW_006399763.1 (32997527..33174765)

NW_006399763.1Genomic Context describing neighboring genes Neighboring gene caspase 8 associated protein 2 Neighboring gene myosin, light chain 6, alkali, smooth muscle and non-muscle pseudogene Neighboring gene uncharacterized LOC102868438 Neighboring gene eukaryotic translation initiation factor 1-like Neighboring gene myosin, light chain 6B, alkali, smooth muscle and non-muscle pseudogene Neighboring gene LYR motif containing 2 Neighboring gene ankyrin repeat domain 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006399763 unplaced scaffold reference EleEdw1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
midasin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elephantulus edwardii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EleEdw1.0

Genomic

  1. NW_006399763.1 Reference EleEdw1.0

    Range
    32997527..33174765
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006881247.1 → XP_006881309.1  midasin

    Conserved Domains (6) summary
    smart00382
    Location:1378 → 1534
    AAA; ATPases associated with a variety of cellular activities
    cd01460
    Location:5319 → 5589
    vWA_midasin; VWA_Midasin: Midasin is a member of the AAA ATPase family. The proteins of this family are unified by their common archetectural organization that is based upon a conserved ATPase domain. The AAA domain of midasin contains six tandem AAA protomers. The ...
    pfam07728
    Location:1380 → 1534
    AAA_5; AAA domain (dynein-related subfamily)
    cl21455
    Location:1076 → 1212
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    cl22451
    Location:4839 → 5009
    ASF1_hist_chap; ASF1 like histone chaperone
    cl23849
    Location:5178 → 5338
    TrbI; Bacterial conjugation TrbI-like protein
Nucleotide Protein
Heading Accession and Version

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