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IGDCC3 immunoglobulin superfamily DCC subclass member 3 [ Elephantulus edwardii (Cape elephant shrew) ]

Gene ID: 102851109, updated on 10-Mar-2024

Summary

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Gene symbol
IGDCC3
Gene description
immunoglobulin superfamily DCC subclass member 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Elephantulus edwardii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current EleEdw1.0 (GCF_000299155.1) Unplaced Scaffold NW_006399800.1 (3537581..3588715)

NW_006399800.1Genomic Context describing neighboring genes Neighboring gene dipeptidyl peptidase 8 Neighboring gene immunoglobulin superfamily DCC subclass member 4 Neighboring gene poly(ADP-ribose) polymerase family member 16 Neighboring gene cartilage intermediate layer protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006399800 unplaced scaffold reference EleEdw1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
immunoglobulin superfamily DCC subclass member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elephantulus edwardii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EleEdw1.0

Genomic

  1. NW_006399800.1 Reference EleEdw1.0

    Range
    3537581..3588715
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006886694.1 → XP_006886756.1  immunoglobulin superfamily DCC subclass member 3

    Conserved Domains (6) summary
    cd00096
    Location:332 → 399
    Ig; Immunoglobulin domain
    smart00410
    Location:130 → 212
    IG_like; Immunoglobulin like
    cd00063
    Location:409 → 502
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:316 → 402
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:507 → 588
    fn3; Fibronectin type III domain
    cl11960
    Location:29 → 120
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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