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ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 [ Chrysochloris asiatica (Cape golden mole) ]

Gene ID: 102842719, updated on 10-Mar-2024

Summary

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Gene symbol
ADAMTS4
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysochloris asiatica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Chrysochloridae; Chrysochlorinae; Chrysochloris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ChrAsi1.0 (GCF_000296735.1) Unplaced Scaffold NW_006408560.1 (21627993..21636415, complement)

NW_006408560.1Genomic Context describing neighboring genes Neighboring gene protoporphyrinogen oxidase Neighboring gene beta-1,4-galactosyltransferase 3 Neighboring gene NADH:ubiquinone oxidoreductase core subunit S2 Neighboring gene Fc fragment of IgE receptor Ig

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006408560 unplaced scaffold reference ChrAsi1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysochloris asiatica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChrAsi1.0 Primary Assembly

Genomic

  1. NW_006408560.1 Reference ChrAsi1.0 Primary Assembly

    Range
    21627993..21636415 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006861670.1 → XP_006861732.1  A disintegrin and metalloproteinase with thrombospondin motifs 4

    UniProtKB/TrEMBL
    A0A9B0TC12
    Conserved Domains (6) summary
    smart00209
    Location:532 → 576
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:219 → 426
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam01421
    Location:219 → 429
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    pfam01562
    Location:79 → 182
    Pep_M12B_propep; Reprolysin family propeptide
    pfam05986
    Location:688 → 804
    ADAM_spacer1; ADAM-TS Spacer 1
    cl15456
    Location:439 → 510
    ADAM_CR; ADAM cysteine-rich
Nucleotide Protein
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