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ZFYVE27 zinc finger FYVE-type containing 27 [ Chrysochloris asiatica (Cape golden mole) ]

Gene ID: 102840619, updated on 11-Apr-2024

Summary

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Gene symbol
ZFYVE27
Gene description
zinc finger FYVE-type containing 27
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysochloris asiatica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Chrysochloridae; Chrysochlorinae; Chrysochloris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ChrAsi1.0 (GCF_000296735.1) Unplaced Scaffold NW_006408521.1 (23773216..23796200)

NW_006408521.1Genomic Context describing neighboring genes Neighboring gene MARVEL domain-containing protein 1-like Neighboring gene MARVEL domain-containing protein 1-like Neighboring gene secreted frizzled related protein 5 Neighboring gene golgin A7 family member B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006408521 unplaced scaffold reference ChrAsi1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum tubular network formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotrophin TRK receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of axon extension IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum tubular network IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in growth cone membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protrudin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysochloris asiatica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChrAsi1.0 Primary Assembly

Genomic

  1. NW_006408521.1 Reference ChrAsi1.0 Primary Assembly

    Range
    23773216..23796200
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006831219.1 → XP_006831282.1  protrudin

    UniProtKB/TrEMBL
    A0A9B0T3C8
    Conserved Domains (1) summary
    cd15723
    Location:353 → 413
    FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

  2. XM_006831220.1 → XP_006831283.1  protrudin

    UniProtKB/TrEMBL
    A0A9B0T4G6
    Conserved Domains (1) summary
    cd15723
    Location:348 → 408
    FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

  3. XM_006831221.1 → XP_006831284.1  protrudin

    UniProtKB/TrEMBL
    A0A9B0SYC9
    Conserved Domains (1) summary
    cd15723
    Location:341 → 401
    FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

  4. XM_006831223.1 → XP_006831286.1  protrudin

    UniProtKB/TrEMBL
    A0A9B0T0Y4
    Conserved Domains (1) summary
    cd15723
    Location:255 → 315
    FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

  5. XM_006831224.1 → XP_006831287.1  protrudin

    UniProtKB/TrEMBL
    A0A9B0WDP3
    Conserved Domains (1) summary
    cd15723
    Location:223 → 283
    FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

  6. XM_006831222.1 → XP_006831285.1  protrudin

    UniProtKB/TrEMBL
    A0A9B0SWJ2
    Conserved Domains (1) summary
    cd15723
    Location:309 → 369
    FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
Nucleotide Protein
Heading Accession and Version

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