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FASN fatty acid synthase [ Chrysochloris asiatica (Cape golden mole) ]

Gene ID: 102836868, updated on 10-Mar-2024

Summary

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Gene symbol
FASN
Gene description
fatty acid synthase
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysochloris asiatica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Chrysochloridae; Chrysochlorinae; Chrysochloris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
40
Annotation release Status Assembly Chr Location
100 current ChrAsi1.0 (GCF_000296735.1) Unplaced Scaffold NW_006408650.1 (1121492..1134302)

NW_006408650.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 57 Neighboring gene chaperonin containing TCP1, subunit 2 (beta) pseudogene Neighboring gene dihydrouridine synthase 1 like Neighboring gene G protein pathway suppressor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006408650 unplaced scaffold reference ChrAsi1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-oxoacyl-[acyl-carrier-protein] synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphopantetheine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fatty acid synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysochloris asiatica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChrAsi1.0 Primary Assembly

Genomic

  1. NW_006408650.1 Reference ChrAsi1.0 Primary Assembly

    Range
    1121492..1134302
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006869484.1 → XP_006869546.1  fatty acid synthase

    UniProtKB/TrEMBL
    A0A9B0TT08
    Conserved Domains (12) summary
    cd05195
    Location:1555 → 1841
    enoyl_red; enoyl reductase of polyketide synthase
    cd08954
    Location:1861 → 2102
    KR_1_FAS_SDR_x; beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 1, complex (x) SDRs
    smart00823
    Location:2115 → 2170
    PKS_PP; Phosphopantetheine attachment site
    smart00829
    Location:1554 → 1841
    PKS_ER; Enoylreductase
    COG3321
    Location:1 → 1014
    PksD; Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]
    cd00833
    Location:2 → 404
    PKS; polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or ...
    pfam00698
    Location:492 → 809
    Acyl_transf_1; Acyl transferase domain
    pfam00975
    Location:2234 → 2491
    Thioesterase; Thioesterase domain
    pfam08242
    Location:1240 → 1339
    Methyltransf_12; Methyltransferase domain
    pfam16197
    Location:363 → 473
    KAsynt_C_assoc; Ketoacyl-synthetase C-terminal extension
    cl00509
    Location:873 → 1102
    hot_dog; The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated ...
    cl21454
    Location:1313 → 1512
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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