U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

FGD5 FYVE, RhoGEF and PH domain containing 5 [ Chrysochloris asiatica (Cape golden mole) ]

Gene ID: 102834328, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
FGD5
Gene description
FYVE, RhoGEF and PH domain containing 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysochloris asiatica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Chrysochloridae; Chrysochlorinae; Chrysochloris
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ChrAsi1.0 (GCF_000296735.1) Unplaced Scaffold NW_006408639.1 (9834349..10038539, complement)

NW_006408639.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S25 Neighboring gene nuclear receptor subfamily 2 group C member 2 Neighboring gene basic leucine zipper and W2 domains 1 pseudogene Neighboring gene chromosome unknown C3orf20 homolog Neighboring gene probable cytosolic iron-sulfur protein assembly protein CIAO1-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006408639 unplaced scaffold reference ChrAsi1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
FYVE, RhoGEF and PH domain-containing protein 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Chrysochloris asiatica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChrAsi1.0 Primary Assembly

Genomic

  1. NW_006408639.1 Reference ChrAsi1.0 Primary Assembly

    Range
    9834349..10038539 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006868675.1 → XP_006868737.1  FYVE, RhoGEF and PH domain-containing protein 5

    UniProtKB/TrEMBL
    A0A9B0TQT4
    Conserved Domains (6) summary
    cd13237
    Location:1362 → 1452
    PH2_FGD5_FGD6; FYVE, RhoGEF and PH domain containing/faciogenital dysplasia proteins 5 and 6 pleckstrin homology (PH) domain, C-terminus
    cd15792
    Location:1097 → 1219
    PH1_FGD5; FYVE, RhoGEF and PH domain containing/faciogenital dysplasia protein 5, N-terminal Pleckstrin Homology (PH) domain
    cd15742
    Location:1233 → 1299
    FYVE_FGD5; FYVE-like domain found in FYVE, RhoGEF and PH domain-containing protein 5 (FGD5) and similar proteins
    pfam00169
    Location:1112 → 1203
    PH; PH domain
    pfam00621
    Location:892 → 1079
    RhoGEF; RhoGEF domain
    pfam07437
    Location:422 → 508
    YfaZ; YfaZ precursor
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.