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MKRN1 makorin ring finger protein 1 [ Chrysochloris asiatica (Cape golden mole) ]

Gene ID: 102828520, updated on 10-Mar-2024

Summary

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Gene symbol
MKRN1
Gene description
makorin ring finger protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysochloris asiatica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Chrysochloridae; Chrysochlorinae; Chrysochloris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ChrAsi1.0 (GCF_000296735.1) Unplaced Scaffold NW_006408559.1 (13874844..13897128, complement)

NW_006408559.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 37 member 3 Neighboring gene RAB19, member RAS oncogene family Neighboring gene DENN domain containing 2A Neighboring gene aarF domain containing kinase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006408559 unplaced scaffold reference ChrAsi1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase makorin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysochloris asiatica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChrAsi1.0 Primary Assembly

Genomic

  1. NW_006408559.1 Reference ChrAsi1.0 Primary Assembly

    Range
    13874844..13897128 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006861173.1 → XP_006861235.1  E3 ubiquitin-protein ligase makorin-1

    UniProtKB/TrEMBL
    A0A9B0TIA7
    Conserved Domains (4) summary
    smart00356
    Location:88 → 110
    ZnF_C3H1; zinc finger
    PHA03096
    Location:218 → 367
    PHA03096; p28-like protein; Provisional
    cd00162
    Location:278 → 332
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    pfam15815
    Location:397 → 477
    MKRN1_C; E3 ubiquitin-protein ligase makorin-1, C-terminal
Nucleotide Protein
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