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HDLBP high density lipoprotein binding protein [ Chrysochloris asiatica (Cape golden mole) ]

Gene ID: 102826599, updated on 10-Mar-2024

Summary

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Gene symbol
HDLBP
Gene description
high density lipoprotein binding protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysochloris asiatica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Chrysochloridae; Chrysochlorinae; Chrysochloris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
100 current ChrAsi1.0 (GCF_000296735.1) Unplaced Scaffold NW_006408832.1 (1019829..1079815, complement)

NW_006408832.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory subunit 7 Neighboring gene anoctamin 7 Neighboring gene septin 2 Neighboring gene FERM, ARH/RhoGEF and pleckstrin domain protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006408832 unplaced scaffold reference ChrAsi1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vigilin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysochloris asiatica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChrAsi1.0 Primary Assembly

Genomic

  1. NW_006408832.1 Reference ChrAsi1.0 Primary Assembly

    Range
    1019829..1079815 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006875207.1 → XP_006875269.1  vigilin

    UniProtKB/TrEMBL
    A0A9B0UAC2
    Conserved Domains (1) summary
    cd02394
    Location:655 → 717
    vigilin_like_KH; K homology RNA-binding domain_vigilin_like. The vigilin family is a large and extended family of multiple KH-domain proteins, including vigilin, also called high density lipoprotein binding protien (HBP), fungal Scp160 and bicaudal-C. Yeast Scp160p has ...

  2. XM_006875208.1 → XP_006875270.1  vigilin

    UniProtKB/TrEMBL
    A0A9B0U881
    Conserved Domains (1) summary
    cd02394
    Location:586 → 648
    vigilin_like_KH; K homology RNA-binding domain_vigilin_like. The vigilin family is a large and extended family of multiple KH-domain proteins, including vigilin, also called high density lipoprotein binding protien (HBP), fungal Scp160 and bicaudal-C. Yeast Scp160p has ...
Nucleotide Protein
Heading Accession and Version

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