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HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 [ Chrysochloris asiatica (Cape golden mole) ]

Gene ID: 102825929, updated on 10-Mar-2024

Summary

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Gene symbol
HERC4
Gene description
HECT and RLD domain containing E3 ubiquitin protein ligase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysochloris asiatica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Chrysochloridae; Chrysochlorinae; Chrysochloris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
100 current ChrAsi1.0 (GCF_000296735.1) Unplaced Scaffold NW_006408538.1 (11402286..11552238, complement)

NW_006408538.1Genomic Context describing neighboring genes Neighboring gene cytochrome c, somatic-like Neighboring gene sirtuin 1 Neighboring gene myopalladin Neighboring gene atonal bHLH transcription factor 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006408538 unplaced scaffold reference ChrAsi1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable E3 ubiquitin-protein ligase HERC4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysochloris asiatica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChrAsi1.0 Primary Assembly

Genomic

  1. NW_006408538.1 Reference ChrAsi1.0 Primary Assembly

    Range
    11402286..11552238 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006835820.1 → XP_006835883.1  probable E3 ubiquitin-protein ligase HERC4

    UniProtKB/TrEMBL
    A0A9B0TC88
    Conserved Domains (3) summary
    smart00119
    Location:727 → 1046
    HECTc; Domain Homologous to E6-AP Carboxyl Terminus with
    cd00078
    Location:701 → 1047
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
    pfam00415
    Location:208 → 257
    RCC1; Regulator of chromosome condensation (RCC1) repeat

  2. XM_006835822.1 → XP_006835885.1  probable E3 ubiquitin-protein ligase HERC4

    UniProtKB/TrEMBL
    A0A9B0T279
    Conserved Domains (3) summary
    smart00119
    Location:735 → 976
    HECTc; Domain Homologous to E6-AP Carboxyl Terminus with
    cd00078
    Location:709 → 977
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
    pfam00415
    Location:208 → 257
    RCC1; Regulator of chromosome condensation (RCC1) repeat

  3. XM_006835821.1 → XP_006835884.1  probable E3 ubiquitin-protein ligase HERC4

    UniProtKB/TrEMBL
    A0A9B0TA10
    Conserved Domains (3) summary
    smart00119
    Location:735 → 1054
    HECTc; Domain Homologous to E6-AP Carboxyl Terminus with
    cd00078
    Location:709 → 1055
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
    pfam00415
    Location:208 → 257
    RCC1; Regulator of chromosome condensation (RCC1) repeat
Nucleotide Protein
Heading Accession and Version

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