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HACL1 2-hydroxyacyl-CoA lyase 1 [ Myotis davidii ]

Gene ID: 102760568, updated on 30-Mar-2024

Summary

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Gene symbol
HACL1
Gene description
2-hydroxyacyl-CoA lyase 1
Locus tag
MDA_GLEAN10020718
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis davidii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006295559.1 (4470459..4514702)

NW_006295559.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 28 Neighboring gene biotinidase Neighboring gene collagen like tail subunit of asymmetric acetylcholinesterase Neighboring gene ELL associated factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006295559.1 Unplaced Scaffold Reference ASM32734v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid alpha-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-hydroxyacyl-CoA lyase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32734v1

Genomic

  1. NW_006295559.1 Reference ASM32734v1

    Range
    4470459..4514702
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015568105.1 → XP_015423591.1  2-hydroxyacyl-CoA lyase 1 isoform X1

    UniProtKB/TrEMBL
    L5LI36
    Conserved Domains (4) summary
    cd07035
    Location:19 → 172
    TPP_PYR_POX_like; Pyrimidine (PYR) binding domain of POX and related proteins
    PRK09259
    Location:8 → 561
    PRK09259; putative oxalyl-CoA decarboxylase; Validated
    cd02004
    Location:377 → 560
    TPP_BZL_OCoD_HPCL; Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL). Pseudomonas fluorescens biovar I BZL ...
    pfam00205
    Location:206 → 332
    TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

  2. XM_006770185.2 → XP_006770248.1  2-hydroxyacyl-CoA lyase 1 isoform X2

    UniProtKB/TrEMBL
    L5LI36
    Conserved Domains (4) summary
    cd07035
    Location:19 → 172
    TPP_PYR_POX_like; Pyrimidine (PYR) binding domain of POX and related proteins
    PRK09259
    Location:8 → 561
    PRK09259; putative oxalyl-CoA decarboxylase; Validated
    cd02004
    Location:377 → 560
    TPP_BZL_OCoD_HPCL; Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL). Pseudomonas fluorescens biovar I BZL ...
    pfam00205
    Location:206 → 332
    TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain
Nucleotide Protein
Heading Accession and Version

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