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CLDN1 claudin 1 [ Myotis davidii ]

Gene ID: 102760064, updated on 30-Mar-2024

Summary

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Gene symbol
CLDN1
Gene description
claudin 1
Locus tag
MDA_GLEAN10014161
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis davidii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Also known as
Claudin-1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006292344.1 (3009929..3025845, complement)

NW_006292344.1Genomic Context describing neighboring genes Neighboring gene tumor protein p63 Neighboring gene 60S ribosomal protein L32 pseudogene Neighboring gene prolyl 3-hydroxylase 2 Neighboring gene claudin 16 Neighboring gene transmembrane protein 207

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006292344.1 Unplaced Scaffold Reference ASM32734v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of bat genomes provides insight into the evolution of flight and immunity. Zhang G, et al. Science, 2013 Jan 25. PMID 23258410, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32734v1

Genomic

  1. NW_006292344.1 Reference ASM32734v1

    Range
    3009929..3025845 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006765871.2 → XP_006765934.1  claudin-1

    See identical proteins and their annotated locations for XP_006765934.1

    UniProtKB/TrEMBL
    L5LQF2
    Conserved Domains (1) summary
    pfam00822
    Location:5 → 173
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein
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