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TMTC3 transmembrane O-mannosyltransferase targeting cadherins 3 [ Myotis davidii ]

Gene ID: 102756252, updated on 30-Mar-2024

Summary

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Gene symbol
TMTC3
Gene description
transmembrane O-mannosyltransferase targeting cadherins 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis davidii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See TMTC3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006299260.1 (652268..722275)

NW_006299260.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown open reading frame, human C12orf50 Neighboring gene RNA 5'-phosphate and 3'-OH ligase 1 Neighboring gene centrosomal protein 290 Neighboring gene uncharacterized LOC107184820 Neighboring gene probable ATP-dependent RNA helicase DDX23 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006299260.1 Unplaced Scaffold Reference ASM32734v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and TPR repeat-containing protein 3
Names
transmembrane and tetratricopeptide repeat containing 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32734v1

Genomic

  1. NW_006299260.1 Reference ASM32734v1

    Range
    652268..722275
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015571137.1 → XP_015426623.1  transmembrane and TPR repeat-containing protein 3 isoform X2

    Conserved Domains (6) summary
    smart00028
    Location:564 → 596
    TPR; Tetratricopeptide repeats
    COG0457
    Location:544 → 807
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:530 → 557
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:597 → 630
    TPR_1; Tetratricopeptide repeat
    pfam08409
    Location:258 → 331
    DUF1736; Domain of unknown function (DUF1736)
    pfam13414
    Location:445 → 511
    TPR_11; TPR repeat

  2. XM_006774738.2 → XP_006774801.1  transmembrane and TPR repeat-containing protein 3 isoform X2

    Conserved Domains (6) summary
    smart00028
    Location:564 → 596
    TPR; Tetratricopeptide repeats
    COG0457
    Location:544 → 807
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:530 → 557
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:597 → 630
    TPR_1; Tetratricopeptide repeat
    pfam08409
    Location:258 → 331
    DUF1736; Domain of unknown function (DUF1736)
    pfam13414
    Location:445 → 511
    TPR_11; TPR repeat

  3. XM_006774739.2 → XP_006774802.1  transmembrane and TPR repeat-containing protein 3 isoform X3

    Conserved Domains (6) summary
    smart00028
    Location:475 → 507
    TPR; Tetratricopeptide repeats
    COG0457
    Location:455 → 718
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:441 → 468
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:508 → 541
    TPR_1; Tetratricopeptide repeat
    pfam08409
    Location:169 → 242
    DUF1736; Domain of unknown function (DUF1736)
    pfam13414
    Location:356 → 422
    TPR_11; TPR repeat

  4. XM_006774737.2 → XP_006774800.1  transmembrane and TPR repeat-containing protein 3 isoform X1

    Conserved Domains (6) summary
    smart00028
    Location:580 → 612
    TPR; Tetratricopeptide repeats
    COG0457
    Location:560 → 823
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:546 → 573
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:613 → 646
    TPR_1; Tetratricopeptide repeat
    pfam08409
    Location:274 → 347
    DUF1736; Domain of unknown function (DUF1736)
    pfam13414
    Location:461 → 527
    TPR_11; TPR repeat

  5. XM_015571134.1 → XP_015426620.1  transmembrane and TPR repeat-containing protein 3 isoform X2

    Conserved Domains (6) summary
    smart00028
    Location:564 → 596
    TPR; Tetratricopeptide repeats
    COG0457
    Location:544 → 807
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:530 → 557
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:597 → 630
    TPR_1; Tetratricopeptide repeat
    pfam08409
    Location:258 → 331
    DUF1736; Domain of unknown function (DUF1736)
    pfam13414
    Location:445 → 511
    TPR_11; TPR repeat

  6. XM_015571136.1 → XP_015426622.1  transmembrane and TPR repeat-containing protein 3 isoform X2

    Conserved Domains (6) summary
    smart00028
    Location:564 → 596
    TPR; Tetratricopeptide repeats
    COG0457
    Location:544 → 807
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:530 → 557
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:597 → 630
    TPR_1; Tetratricopeptide repeat
    pfam08409
    Location:258 → 331
    DUF1736; Domain of unknown function (DUF1736)
    pfam13414
    Location:445 → 511
    TPR_11; TPR repeat

  7. XM_015571135.1 → XP_015426621.1  transmembrane and TPR repeat-containing protein 3 isoform X2

    Conserved Domains (6) summary
    smart00028
    Location:564 → 596
    TPR; Tetratricopeptide repeats
    COG0457
    Location:544 → 807
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:530 → 557
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:597 → 630
    TPR_1; Tetratricopeptide repeat
    pfam08409
    Location:258 → 331
    DUF1736; Domain of unknown function (DUF1736)
    pfam13414
    Location:445 → 511
    TPR_11; TPR repeat
Nucleotide Protein
Heading Accession and Version

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