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SPOPL speckle type BTB/POZ protein like [ Myotis davidii ]

Gene ID: 102755917, updated on 30-Mar-2024

Summary

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Gene symbol
SPOPL
Gene description
speckle type BTB/POZ protein like
Locus tag
MDA_GLEAN10005540
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis davidii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006288443.1 (457599..509878, complement)

NW_006288443.1Genomic Context describing neighboring genes Neighboring gene nudC domain-containing protein 2 pseudogene Neighboring gene neurexophilin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006288443.1 Unplaced Scaffold Reference ASM32734v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of bat genomes provides insight into the evolution of flight and immunity. Zhang G, et al. Science, 2013 Jan 25. PMID 23258410, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
speckle-type POZ protein-like
Names
Speckle-type POZ protein-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32734v1

Genomic

  1. NW_006288443.1 Reference ASM32734v1

    Range
    457599..509878 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015561753.1 → XP_015417239.1  speckle-type POZ protein-like isoform X1

    UniProtKB/TrEMBL
    L5M353
    Conserved Domains (3) summary
    cd18343
    Location:211 → 333
    BTB_POZ_SPOPL; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in speckle-type POZ protein-like (SPOPL)
    cd18519
    Location:329 → 424
    BACK_SPOPL; BACK (BTB and C-terminal Kelch) domain found in speckle-type POZ protein-like (SPOPL)
    cl02446
    Location:28 → 160
    MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the membrane ...

  2. XM_015561755.1 → XP_015417241.1  speckle-type POZ protein-like isoform X2

    Conserved Domains (3) summary
    cd18519
    Location:300 → 395
    BACK_SPOPL; BACK (BTB and C-terminal Kelch) domain found in speckle-type POZ protein-like (SPOPL)
    cl02446
    Location:28 → 160
    MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the membrane ...
    cl38908
    Location:211 → 304
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily

  3. XM_015561756.1 → XP_015417242.1  speckle-type POZ protein-like isoform X3

    Conserved Domains (3) summary
    cd18343
    Location:179 → 301
    BTB_POZ_SPOPL; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in speckle-type POZ protein-like (SPOPL)
    cd18519
    Location:297 → 392
    BACK_SPOPL; BACK (BTB and C-terminal Kelch) domain found in speckle-type POZ protein-like (SPOPL)
    cl02446
    Location:28 → 166
    MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the membrane ...

  4. XM_015561752.1 → XP_015417238.1  speckle-type POZ protein-like isoform X1

    UniProtKB/TrEMBL
    L5M353
    Conserved Domains (3) summary
    cd18343
    Location:211 → 333
    BTB_POZ_SPOPL; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in speckle-type POZ protein-like (SPOPL)
    cd18519
    Location:329 → 424
    BACK_SPOPL; BACK (BTB and C-terminal Kelch) domain found in speckle-type POZ protein-like (SPOPL)
    cl02446
    Location:28 → 160
    MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the membrane ...

  5. XM_015561754.1 → XP_015417240.1  speckle-type POZ protein-like isoform X1

    UniProtKB/TrEMBL
    L5M353
    Conserved Domains (3) summary
    cd18343
    Location:211 → 333
    BTB_POZ_SPOPL; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in speckle-type POZ protein-like (SPOPL)
    cd18519
    Location:329 → 424
    BACK_SPOPL; BACK (BTB and C-terminal Kelch) domain found in speckle-type POZ protein-like (SPOPL)
    cl02446
    Location:28 → 160
    MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the membrane ...

  6. XM_015561758.1 → XP_015417244.1  speckle-type POZ protein-like isoform X4

    Conserved Domains (4) summary
    smart00225
    Location:117 → 213
    BTB; Broad-Complex, Tramtrack and Bric a brac
    cd14734
    Location:213 → 293
    SPOP_C; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins
    pfam00651
    Location:106 → 210
    BTB; BTB/POZ domain
    cl02446
    Location:1 → 44
    MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the membrane ...
Nucleotide Protein
Heading Accession and Version

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