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ZSCAN30 zinc finger and SCAN domain containing 30 [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102750085, updated on 10-Mar-2024

Summary

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Gene symbol
ZSCAN30
Gene description
zinc finger and SCAN domain containing 30
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Orthologs
human mouse all
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Genomic context

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See ZSCAN30 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006384940.1 (378360..392150)

NW_006384940.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 396 Neighboring gene zinc finger protein 24 Neighboring gene zinc finger protein 271-like Neighboring gene proteasome activator complex subunit 3 pseudogene Neighboring gene microtubule-associated protein RP/EB family member 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006384940 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and SCAN domain-containing protein 30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006384940.1 Reference LepWed1.0 Primary Assembly

    Range
    378360..392150
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031040877.1 → XP_030896737.1  zinc finger and SCAN domain-containing protein 30

    UniProtKB/TrEMBL
    A0A7F8RTW8
    Conserved Domains (4) summary
    COG5048
    Location:326 → 477
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:329 → 349
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:299 → 321
    zf-C2H2; Zinc finger, C2H2 type
    cl02605
    Location:44 → 154
    SCAN; SCAN oligomerization domain

  2. XM_031040878.1 → XP_030896738.1  zinc finger and SCAN domain-containing protein 30

    UniProtKB/TrEMBL
    A0A7F8RTW8
    Conserved Domains (4) summary
    COG5048
    Location:326 → 477
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:329 → 349
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:299 → 321
    zf-C2H2; Zinc finger, C2H2 type
    cl02605
    Location:44 → 154
    SCAN; SCAN oligomerization domain

  3. XM_031040875.1 → XP_030896735.1  zinc finger and SCAN domain-containing protein 30

    UniProtKB/TrEMBL
    A0A7F8RTW8
    Conserved Domains (4) summary
    COG5048
    Location:326 → 477
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:329 → 349
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:299 → 321
    zf-C2H2; Zinc finger, C2H2 type
    cl02605
    Location:44 → 154
    SCAN; SCAN oligomerization domain

  4. XM_031040876.1 → XP_030896736.1  zinc finger and SCAN domain-containing protein 30

    UniProtKB/TrEMBL
    A0A7F8RTW8
    Conserved Domains (4) summary
    COG5048
    Location:326 → 477
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:329 → 349
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:299 → 321
    zf-C2H2; Zinc finger, C2H2 type
    cl02605
    Location:44 → 154
    SCAN; SCAN oligomerization domain
Nucleotide Protein
Heading Accession and Version

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