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LOC102746905 sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102746905, updated on 2-Sep-2023

Summary

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Gene symbol
LOC102746905
Gene description
sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006384792.1 (1700..29414)

NW_006384792.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene thioredoxin domain containing 8 Neighboring gene ADP-sugar pyrophosphatase pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006384792 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006384792.1 Reference LepWed1.0 Primary Assembly

    Range
    1700..29414
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006744050.2 → XP_006744113.1  sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1

    UniProtKB/TrEMBL
    A0A2U3YKJ7
    Conserved Domains (4) summary
    PHA02817
    Location:12 → 82
    PHA02817; EEV Host range protein; Provisional
    smart00032
    Location:269 → 321
    CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
    PHA02927
    Location:48 → 264
    PHA02927; secreted complement-binding protein; Provisional
    cd00054
    Location:360 → 384
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
Nucleotide Protein
Heading Accession and Version

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