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ERGIC1 endoplasmic reticulum-golgi intermediate compartment 1 [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102741893, updated on 10-Mar-2024

Summary

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Gene symbol
ERGIC1
Gene description
endoplasmic reticulum-golgi intermediate compartment 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006383958.1 (708161..747047, complement)

NW_006383958.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115942562 Neighboring gene ribosomal protein L26 like 1 Neighboring gene PDZ domain-containing protein 8-like Neighboring gene dual specificity phosphatase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006383958 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endoplasmic reticulum-Golgi intermediate compartment protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006383958.1 Reference LepWed1.0 Primary Assembly

    Range
    708161..747047 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031033111.1 → XP_030888971.1  endoplasmic reticulum-Golgi intermediate compartment protein 1

    UniProtKB/TrEMBL
    A0A7F8R743
    Conserved Domains (2) summary
    pfam07970
    Location:151 → 206
    COPIIcoated_ERV; Endoplasmic reticulum vesicle transporter
    pfam13850
    Location:54 → 145
    ERGIC_N; Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)
Nucleotide Protein
Heading Accession and Version

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