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PER2 period circadian regulator 2 [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102737351, updated on 10-Mar-2024

Summary

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Gene symbol
PER2
Gene description
period circadian regulator 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Orthologs
human mouse all
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Genomic context

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See PER2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006386363.1 (49757..80457)

NW_006386363.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115937832 Neighboring gene uncharacterized LOC115937831 Neighboring gene ILK associated serine/threonine phosphatase Neighboring gene hes family bHLH transcription factor 6 Neighboring gene kelch like family member 30

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006386363 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in circadian regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in entrainment of circadian clock by photoperiod IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
period circadian protein homolog 2
Names
period circadian clock 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006386363.1 Reference LepWed1.0 Primary Assembly

    Range
    49757..80457
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031020744.1 → XP_030876604.1  period circadian protein homolog 2 isoform X1

    UniProtKB/TrEMBL
    A0A7F8Q5V0
    Conserved Domains (3) summary
    PHA03247
    Location:786 → 1052
    PHA03247; large tegument protein UL36; Provisional
    cd00130
    Location:327 → 428
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam12114
    Location:1054 → 1248
    Period_C; Period protein 2/3C-terminal region

  2. XM_031020745.1 → XP_030876605.1  period circadian protein homolog 2 isoform X2

    UniProtKB/TrEMBL
    A0A7F8Q5S5
    Conserved Domains (3) summary
    PHA03247
    Location:765 → 1031
    PHA03247; large tegument protein UL36; Provisional
    cd00130
    Location:306 → 407
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam12114
    Location:1033 → 1227
    Period_C; Period protein 2/3C-terminal region
Nucleotide Protein
Heading Accession and Version

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