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CDK12 cyclin dependent kinase 12 [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102735422, updated on 10-Mar-2024

Summary

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Gene symbol
CDK12
Gene description
cyclin dependent kinase 12
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006385441.1 (163102..232842, complement)

NW_006385441.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102735020 Neighboring gene titin-cap Neighboring gene U6 spliceosomal RNA Neighboring gene mediator complex subunit 1 Neighboring gene F-box and leucine rich repeat protein 20

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006385441 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II CTD heptapeptide repeat kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cyclin/CDK positive transcription elongation factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-dependent kinase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006385441.1 Reference LepWed1.0 Primary Assembly

    Range
    163102..232842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006746946.2 → XP_006747009.1  cyclin-dependent kinase 12 isoform X3

    UniProtKB/TrEMBL
    A0A2U3YTE6
    Conserved Domains (1) summary
    cd07864
    Location:720 → 1021
    STKc_CDK12; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

  2. XM_006746945.2 → XP_006747008.1  cyclin-dependent kinase 12 isoform X1

    UniProtKB/TrEMBL
    A0A2U3YTU7
    Conserved Domains (1) summary
    cd07864
    Location:720 → 1021
    STKc_CDK12; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

  3. XM_031017748.1 → XP_030873608.1  cyclin-dependent kinase 12 isoform X2

    UniProtKB/TrEMBL
    A0A7F8PZM3
    Conserved Domains (1) summary
    cd07864
    Location:719 → 1020
    STKc_CDK12; Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

RNA

  1. XR_004072247.1 RNA Sequence

  2. XR_004072244.1 RNA Sequence

  3. XR_004072242.1 RNA Sequence

  4. XR_004072248.1 RNA Sequence

  5. XR_004072246.1 RNA Sequence

  6. XR_004072243.1 RNA Sequence

  7. XR_004072240.1 RNA Sequence

  8. XR_004072241.1 RNA Sequence

  9. XR_004072239.1 RNA Sequence

  10. XR_004072245.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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