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ESRRA estrogen related receptor alpha [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102725946, updated on 10-Mar-2024

Summary

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Gene symbol
ESRRA
Gene description
estrogen related receptor alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Orthologs
human mouse all
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Genomic context

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See ESRRA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006385255.1 (437480..444978)

NW_006385255.1Genomic Context describing neighboring genes Neighboring gene BCL2 associated agonist of cell death Neighboring gene potassium channel subfamily K member 4 Neighboring gene tRNA methyltransferase activator subunit 11-2 Neighboring gene peroxiredoxin 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006385255 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear steroid receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
steroid hormone receptor ERR1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006385255.1 Reference LepWed1.0 Primary Assembly

    Range
    437480..444978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031016929.1 → XP_030872789.1  steroid hormone receptor ERR1 isoform X1

    UniProtKB/TrEMBL
    A0A2U3YRF8
    Conserved Domains (2) summary
    cd06946
    Location:197 → 420
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:73 → 168
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  2. XM_006746246.2 → XP_006746309.1  steroid hormone receptor ERR1 isoform X1

    See identical proteins and their annotated locations for XP_006746309.1

    UniProtKB/TrEMBL
    A0A2U3YRF8
    Conserved Domains (2) summary
    cd06946
    Location:197 → 420
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:73 → 168
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  3. XM_006746247.2 → XP_006746310.1  steroid hormone receptor ERR1 isoform X2

    UniProtKB/TrEMBL
    A0A2U3YRF5
    Conserved Domains (2) summary
    cd06946
    Location:196 → 419
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:73 → 168
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers
Nucleotide Protein
Heading Accession and Version

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