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LOC102716589 squamosa promoter-binding-like protein 8 [ Oryza brachyantha (malo sina) ]

Gene ID: 102716589, updated on 7-Dec-2023

Summary

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Gene symbol
LOC102716589
Gene description
squamosa promoter-binding-like protein 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza brachyantha
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Genomic context

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See LOC102716589 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ObraRS2 (GCF_000231095.2) 4 NC_023166.2 (20103854..20108136)
101 previous assembly Oryza_brachyantha.v1.4b (GCF_000231095.1) 4 NC_023166.1 (19723857..19728125)

Chromosome 4 - NC_023166.2Genomic Context describing neighboring genes Neighboring gene ethylene-responsive transcription factor ERF003-like Neighboring gene plasma membrane ATPase Neighboring gene peroxidase 16-like Neighboring gene uncharacterized LOC107304133 Neighboring gene farnesyl pyrophosphate synthase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
squamosa promoter-binding-like protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryza brachyantha Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ObraRS2 Primary Assembly

Genomic

  1. NC_023166.2 Reference ObraRS2 Primary Assembly

    Range
    20103854..20108136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006652878.3 → XP_006652941.1  squamosa promoter-binding-like protein 8

    UniProtKB/TrEMBL
    J3M274
    Conserved Domains (1) summary
    pfam03110
    Location:185 → 260
    SBP; SBP domain
Nucleotide Protein
Heading Accession and Version

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