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znhit1 zinc finger, HIT-type containing 1 [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102697927, updated on 10-Mar-2024

Summary

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Gene symbol
znhit1
Gene description
zinc finger, HIT-type containing 1
See related
Ensembl:ENSLOCG00000013646
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG2
Exon count:
5
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG2 NC_023180.1 (59412842..59416858)

Linkage Group LG2 - NC_023180.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 167 Neighboring gene enolase 3, (beta, muscle) Neighboring gene alpha-N-acetylneuraminide alpha-2,8-sialyltransferase-like Neighboring gene cysteinyl leukotriene receptor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023180.1 Chromosome LG2 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Swr1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger HIT domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023180.1 Reference LepOcu1 Primary Assembly

    Range
    59412842..59416858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006627353.2 → XP_006627416.1  zinc finger HIT domain-containing protein 1

    UniProtKB/TrEMBL
    W5N866
    Related
    ENSLOCP00000016825.1, ENSLOCT00000016855.1
    Conserved Domains (2) summary
    pfam04438
    Location:113 → 140
    zf-HIT; HIT zinc finger
    cl02154
    Location:67 → 135
    YL1_C; YL1 nuclear protein C-terminal domain
Nucleotide Protein
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