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fibcd1 fibrinogen C domain containing 1 [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102696998, updated on 2-Nov-2023

Summary

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Gene symbol
fibcd1
Gene description
fibrinogen C domain containing 1
See related
Ensembl:ENSLOCG00000006394
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
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Genomic context

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Location:
chromosome: LG21
Exon count:
8
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG21 NC_023199.1 (14955056..15053472)

Linkage Group LG21 - NC_023199.1Genomic Context describing neighboring genes Neighboring gene laminin, gamma 3 Neighboring gene uncharacterized LOC107079891 Neighboring gene uncharacterized LOC107079890 Neighboring gene TNF receptor-associated factor 1-like Neighboring gene TNF receptor-associated factor 1 Neighboring gene PHD finger protein 19

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023199.1 Chromosome LG21 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fibrinogen C domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023199.1 Reference LepOcu1 Primary Assembly

    Range
    14955056..15053472
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015367251.1 → XP_015222737.1  fibrinogen C domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    W5MH65
    Conserved Domains (1) summary
    cd00087
    Location:267 → 482
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...

  2. XM_015367252.1 → XP_015222738.1  fibrinogen C domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    W5MH65
    Related
    ENSLOCP00000007724.1, ENSLOCT00000007733.1
    Conserved Domains (1) summary
    cd00087
    Location:267 → 482
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...

  3. XM_006640768.2 → XP_006640831.1  fibrinogen C domain-containing protein 1 isoform X2

    Conserved Domains (1) summary
    cd00087
    Location:240 → 455
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...
Nucleotide Protein
Heading Accession and Version

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