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hnrnph3 heterogeneous nuclear ribonucleoprotein H3 (2H9) [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102696966, updated on 10-Mar-2024

Summary

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Gene symbol
hnrnph3
Gene description
heterogeneous nuclear ribonucleoprotein H3 (2H9)
See related
Ensembl:ENSLOCG00000009247
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG5
Exon count:
13
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG5 NC_023183.1 (18112734..18124476, complement)

Linkage Group LG5 - NC_023183.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 15 Neighboring gene RUN and FYVE domain containing 2 Neighboring gene phenazine biosynthesis like protein domain containing Neighboring gene DNA replication helicase/nuclease 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023183.1 Chromosome LG5 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heterogeneous nuclear ribonucleoprotein H3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023183.1 Reference LepOcu1 Primary Assembly

    Range
    18112734..18124476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015346946.1 → XP_015202432.1  heterogeneous nuclear ribonucleoprotein H3

    UniProtKB/TrEMBL
    W5MSC3, W5MSD3
    Related
    ENSLOCP00000011282.1, ENSLOCT00000011298.1
    Conserved Domains (4) summary
    COG0724
    Location:18 → 169
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12503
    Location:9 → 85
    RRM1_hnRNPH_GRSF1_like; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein (hnRNP) H protein family, G-rich sequence factor 1 (GRSF-1) and similar proteins
    cd12732
    Location:90 → 185
    RRM2_hnRNPH3; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
    cd12735
    Location:293 → 367
    RRM3_hnRNPH3; RNA recognition motif 3 in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins

  2. XM_015346948.1 → XP_015202434.1  heterogeneous nuclear ribonucleoprotein H3

    UniProtKB/TrEMBL
    W5MSC3, W5MSD3
    Conserved Domains (4) summary
    COG0724
    Location:18 → 169
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12503
    Location:9 → 85
    RRM1_hnRNPH_GRSF1_like; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein (hnRNP) H protein family, G-rich sequence factor 1 (GRSF-1) and similar proteins
    cd12732
    Location:90 → 185
    RRM2_hnRNPH3; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
    cd12735
    Location:293 → 367
    RRM3_hnRNPH3; RNA recognition motif 3 in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins

  3. XM_015346949.1 → XP_015202435.1  heterogeneous nuclear ribonucleoprotein H3

    UniProtKB/TrEMBL
    W5MSC3, W5MSD3
    Conserved Domains (4) summary
    COG0724
    Location:18 → 169
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12503
    Location:9 → 85
    RRM1_hnRNPH_GRSF1_like; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein (hnRNP) H protein family, G-rich sequence factor 1 (GRSF-1) and similar proteins
    cd12732
    Location:90 → 185
    RRM2_hnRNPH3; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
    cd12735
    Location:293 → 367
    RRM3_hnRNPH3; RNA recognition motif 3 in heterogeneous nuclear ribonucleoprotein H3 (hnRNP H3) and similar proteins
Nucleotide Protein
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