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endog endonuclease G [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102696218, updated on 10-Mar-2024

Summary

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Gene symbol
endog
Gene description
endonuclease G
See related
Ensembl:ENSLOCG00000004163
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG21
Exon count:
3
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG21 NC_023199.1 (8351231..8353737, complement)

Linkage Group LG21 - NC_023199.1Genomic Context describing neighboring genes Neighboring gene surfeit 6 Neighboring gene kynurenine aminotransferase 1 Neighboring gene SPOUT domain containing methyltransferase 1 Neighboring gene uncharacterized LOC107079858 Neighboring gene mitoguardin 2 Neighboring gene globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023199.1 Chromosome LG21 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA endodeoxyribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in apoptotic DNA fragmentation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endonuclease G, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023199.1 Reference LepOcu1 Primary Assembly

    Range
    8351231..8353737 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006640678.2 → XP_006640741.1  endonuclease G, mitochondrial isoform X1

    UniProtKB/TrEMBL
    W5M9B9
    Related
    ENSLOCP00000004978.1, ENSLOCT00000004986.1
    Conserved Domains (1) summary
    smart00477
    Location:92 → 299
    NUC; DNA/RNA non-specific endonuclease

  2. XM_015366882.1 → XP_015222368.1  endonuclease G, mitochondrial isoform X3

    Conserved Domains (1) summary
    cl00089
    Location:92 → 217
    NUC; DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers.

  3. XM_015366881.1 → XP_015222367.1  endonuclease G, mitochondrial isoform X2

    Conserved Domains (1) summary
    smart00477
    Location:92 → 217
    NUC; DNA/RNA non-specific endonuclease
Nucleotide Protein
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