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snn stannin [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102695412, updated on 10-Mar-2024

Summary

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Gene symbol
snn
Gene description
stannin
See related
Ensembl:ENSLOCG00000018088
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG13
Exon count:
2
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG13 NC_023191.1 (32197..36624)

Linkage Group LG13 - NC_023191.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107078928 Neighboring gene thioredoxin domain containing 11 Neighboring gene zinc finger CCCH-type containing 7A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023191.1 Chromosome LG13 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stannin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023191.1 Reference LepOcu1 Primary Assembly

    Range
    32197..36624
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015359845.1 → XP_015215331.1  stannin

    UniProtKB/TrEMBL
    W5NNI0
    Conserved Domains (3) summary
    pfam09049
    Location:2 → 33
    SNN_transmemb; Stannin transmembrane
    pfam09050
    Location:34 → 59
    SNN_linker; Stannin unstructured linker
    pfam09051
    Location:61 → 86
    SNN_cytoplasm; Stannin cytoplasmic

  2. XM_015359844.1 → XP_015215330.1  stannin

    UniProtKB/TrEMBL
    W5NNI0
    Related
    ENSLOCP00000022189.1, ENSLOCT00000022230.1
    Conserved Domains (3) summary
    pfam09049
    Location:2 → 33
    SNN_transmemb; Stannin transmembrane
    pfam09050
    Location:34 → 59
    SNN_linker; Stannin unstructured linker
    pfam09051
    Location:61 → 86
    SNN_cytoplasm; Stannin cytoplasmic
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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