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rai1 retinoic acid induced 1 [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102693711, updated on 10-Mar-2024

Summary

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Gene symbol
rai1
Gene description
retinoic acid induced 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG13
Exon count:
6
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG13 NC_023191.1 (16084723..16121995)

Linkage Group LG13 - NC_023191.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107079010 Neighboring gene FAM20C golgi associated secretory pathway kinase b Neighboring gene forkhead box L3 Neighboring gene sterol regulatory element binding transcription factor 1 Neighboring gene target of myb1 like 2 membrane trafficking protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023191.1 Chromosome LG13 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in circadian regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
retinoic acid-induced protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023191.1 Reference LepOcu1 Primary Assembly

    Range
    16084723..16121995
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015360162.1 → XP_015215648.1  retinoic acid-induced protein 1 isoform X1

    UniProtKB/TrEMBL
    W5MQJ7
    Conserved Domains (1) summary
    cl22851
    Location:1580 → 1794
    PHD_SF; PHD finger superfamily

  2. XM_015360163.1 → XP_015215649.1  retinoic acid-induced protein 1 isoform X2

    UniProtKB/TrEMBL
    W5MQJ7
    Conserved Domains (1) summary
    cl22851
    Location:1580 → 1794
    PHD_SF; PHD finger superfamily

  3. XM_015360160.1 → XP_015215646.1  retinoic acid-induced protein 1 isoform X1

    UniProtKB/TrEMBL
    W5MQJ7
    Conserved Domains (1) summary
    cl22851
    Location:1580 → 1794
    PHD_SF; PHD finger superfamily
Nucleotide Protein
Heading Accession and Version

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