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znf518b zinc finger protein 518B [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102690998, updated on 10-Mar-2024

Summary

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Gene symbol
znf518b
Gene description
zinc finger protein 518B
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG4
Exon count:
4
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG4 NC_023182.1 (35147688..35175533, complement)

Linkage Group LG4 - NC_023182.1Genomic Context describing neighboring genes Neighboring gene heparan sulfate (glucosamine) 3-O-sulfotransferase 1 Neighboring gene cytokine dependent hematopoietic cell linker Neighboring gene uncharacterized LOC107077103 Neighboring gene WD repeat domain 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023182.1 Chromosome LG4 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 518B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023182.1 Reference LepOcu1 Primary Assembly

    Range
    35147688..35175533 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015345034.1 → XP_015200520.1  zinc finger protein 518B

    UniProtKB/TrEMBL
    W5MUR1
    Conserved Domains (1) summary
    sd00017
    Location:42 → 62
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_015345035.1 → XP_015200521.1  zinc finger protein 518B

    UniProtKB/TrEMBL
    W5MUR1
    Conserved Domains (1) summary
    sd00017
    Location:42 → 62
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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