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pde4d phosphodiesterase 4D, cAMP-specific [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102690860, updated on 10-Mar-2024

Summary

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Gene symbol
pde4d
Gene description
phosphodiesterase 4D, cAMP-specific
See related
Ensembl:ENSLOCG00000007665
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: LG2
Exon count:
24
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG2 NC_023180.1 (22813517..23315909, complement)

Linkage Group LG2 - NC_023180.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102689775 Neighboring gene RAB3C, member RAS oncogene family Neighboring gene DEP domain containing 1B Neighboring gene ELOVL fatty acid elongase 7a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023180.1 Chromosome LG2 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-AMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cAMP-specific 3',5'-cyclic phosphodiesterase 4D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023180.1 Reference LepOcu1 Primary Assembly

    Range
    22813517..23315909 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006626906.2 → XP_006626969.2  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X3

    UniProtKB/TrEMBL
    W5MLR6
    Conserved Domains (1) summary
    pfam00233
    Location:400 → 641
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  2. XM_015367790.1 → XP_015223276.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X1

    UniProtKB/TrEMBL
    W5MLR6
    Conserved Domains (1) summary
    pfam00233
    Location:421 → 662
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  3. XM_015367796.1 → XP_015223282.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X2

    UniProtKB/TrEMBL
    W5MLR6
    Conserved Domains (2) summary
    pfam00233
    Location:401 → 642
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam17084
    Location:48 → 276
    TDA11; Topoisomerase I damage affected protein 11

  4. XM_015367814.1 → XP_015223300.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X5

    UniProtKB/TrEMBL
    W5MLP9
    Related
    ENSLOCP00000009308.1, ENSLOCT00000009319.1
    Conserved Domains (1) summary
    pfam00233
    Location:360 → 601
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  5. XM_015367827.1 → XP_015223313.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X7

    UniProtKB/TrEMBL
    W5MLR6
    Related
    ENSLOCP00000009325.1, ENSLOCT00000009336.1
    Conserved Domains (1) summary
    pfam00233
    Location:315 → 556
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  6. XM_015367809.1 → XP_015223295.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X4

    UniProtKB/TrEMBL
    W5MLR6
    Conserved Domains (1) summary
    pfam00233
    Location:361 → 602
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  7. XM_015367821.1 → XP_015223307.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X6

    UniProtKB/TrEMBL
    W5MLR6
    Conserved Domains (1) summary
    pfam00233
    Location:353 → 594
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  8. XM_015367833.1 → XP_015223319.1  cAMP-specific 3',5'-cyclic phosphodiesterase 4D isoform X8

    Conserved Domains (1) summary
    pfam00233
    Location:170 → 411
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein
Heading Accession and Version

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