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atp2b2 ATPase plasma membrane Ca2+ transporting 2 [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102689464, updated on 10-Mar-2024

Summary

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Gene symbol
atp2b2
Gene description
ATPase plasma membrane Ca2+ transporting 2
See related
Ensembl:ENSLOCG00000013890
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG5
Exon count:
28
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG5 NC_023183.1 (46307276..46473329)

Linkage Group LG5 - NC_023183.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain-containing glutamate-rich protein 1-like Neighboring gene nucleolar protein 8 Neighboring gene isoleucyl-tRNA synthetase 1 Neighboring gene solute carrier family 6 member 11b Neighboring gene solute carrier family 6 member 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023183.1 Chromosome LG5 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables P-type calcium transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables PDZ domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plasma membrane calcium-transporting ATPase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023183.1 Reference LepOcu1 Primary Assembly

    Range
    46307276..46473329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015348202.1 → XP_015203688.1  plasma membrane calcium-transporting ATPase 2 isoform X1

    UniProtKB/TrEMBL
    W5N924
    Conserved Domains (7) summary
    TIGR01517
    Location:12 → 1100
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam00122
    Location:193 → 501
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:916 → 1094
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:51 → 113
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam12424
    Location:1139 → 1186
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
    pfam12710
    Location:703 → 842
    HAD; haloacid dehalogenase-like hydrolase
    pfam13246
    Location:562 → 651
    Cation_ATPase; Cation transport ATPase (P-type)

  2. XM_015348203.1 → XP_015203689.1  plasma membrane calcium-transporting ATPase 2 isoform X1

    UniProtKB/TrEMBL
    W5N924
    Conserved Domains (7) summary
    TIGR01517
    Location:12 → 1100
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam00122
    Location:193 → 501
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:916 → 1094
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:51 → 113
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam12424
    Location:1139 → 1186
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
    pfam12710
    Location:703 → 842
    HAD; haloacid dehalogenase-like hydrolase
    pfam13246
    Location:562 → 651
    Cation_ATPase; Cation transport ATPase (P-type)

  3. XM_015348205.1 → XP_015203691.1  plasma membrane calcium-transporting ATPase 2 isoform X3

    UniProtKB/TrEMBL
    W5N924
    Related
    ENSLOCP00000017133.1, ENSLOCT00000017163.1
    Conserved Domains (7) summary
    TIGR01517
    Location:12 → 1100
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam00122
    Location:193 → 501
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:916 → 1094
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:51 → 113
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam12424
    Location:1139 → 1180
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
    pfam12710
    Location:703 → 842
    HAD; haloacid dehalogenase-like hydrolase
    pfam13246
    Location:562 → 651
    Cation_ATPase; Cation transport ATPase (P-type)

  4. XM_015348208.1 → XP_015203694.1  plasma membrane calcium-transporting ATPase 2 isoform X8

    UniProtKB/TrEMBL
    W5N924
    Conserved Domains (7) summary
    TIGR01517
    Location:12 → 1058
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam00122
    Location:193 → 459
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:874 → 1052
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:51 → 113
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam12424
    Location:1097 → 1138
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
    pfam12710
    Location:661 → 800
    HAD; haloacid dehalogenase-like hydrolase
    pfam13246
    Location:520 → 609
    Cation_ATPase; Cation transport ATPase (P-type)

  5. XM_015348207.1 → XP_015203693.1  plasma membrane calcium-transporting ATPase 2 isoform X6

    UniProtKB/TrEMBL
    W5N924
    Conserved Domains (7) summary
    TIGR01517
    Location:12 → 1100
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam00122
    Location:193 → 501
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:916 → 1094
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:51 → 113
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam12424
    Location:1139 → 1180
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
    pfam12710
    Location:703 → 842
    HAD; haloacid dehalogenase-like hydrolase
    pfam13246
    Location:562 → 651
    Cation_ATPase; Cation transport ATPase (P-type)

  6. XM_015348206.1 → XP_015203692.1  plasma membrane calcium-transporting ATPase 2 isoform X5

    UniProtKB/TrEMBL
    W5N924, W5N928
    Related
    ENSLOCP00000017137.1, ENSLOCT00000017168.1
    Conserved Domains (7) summary
    TIGR01517
    Location:12 → 1100
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam00122
    Location:193 → 501
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:916 → 1094
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:51 → 113
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam12424
    Location:1139 → 1180
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
    pfam12710
    Location:703 → 842
    HAD; haloacid dehalogenase-like hydrolase
    pfam13246
    Location:562 → 651
    Cation_ATPase; Cation transport ATPase (P-type)

  7. XM_015348199.1 → XP_015203685.1  plasma membrane calcium-transporting ATPase 2 isoform X1

    UniProtKB/TrEMBL
    W5N924
    Conserved Domains (7) summary
    TIGR01517
    Location:12 → 1100
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam00122
    Location:193 → 501
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:916 → 1094
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:51 → 113
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam12424
    Location:1139 → 1186
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
    pfam12710
    Location:703 → 842
    HAD; haloacid dehalogenase-like hydrolase
    pfam13246
    Location:562 → 651
    Cation_ATPase; Cation transport ATPase (P-type)

  8. XM_015348204.1 → XP_015203690.1  plasma membrane calcium-transporting ATPase 2 isoform X2

    UniProtKB/TrEMBL
    W5N924
    Conserved Domains (7) summary
    TIGR01517
    Location:12 → 1069
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam00122
    Location:193 → 470
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:885 → 1063
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:51 → 113
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam12424
    Location:1108 → 1155
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
    pfam12710
    Location:672 → 811
    HAD; haloacid dehalogenase-like hydrolase
    pfam13246
    Location:531 → 620
    Cation_ATPase; Cation transport ATPase (P-type)

  9. XM_006631018.2 → XP_006631081.1  plasma membrane calcium-transporting ATPase 2 isoform X4

    UniProtKB/TrEMBL
    W5N924
    Conserved Domains (7) summary
    TIGR01517
    Location:12 → 1058
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam00122
    Location:193 → 459
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:874 → 1052
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:51 → 113
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam12424
    Location:1097 → 1144
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
    pfam12710
    Location:661 → 800
    HAD; haloacid dehalogenase-like hydrolase
    pfam13246
    Location:520 → 609
    Cation_ATPase; Cation transport ATPase (P-type)

  10. XM_006631019.2 → XP_006631082.1  plasma membrane calcium-transporting ATPase 2 isoform X7

    UniProtKB/TrEMBL
    W5N924
    Conserved Domains (7) summary
    TIGR01517
    Location:12 → 1044
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam00122
    Location:193 → 445
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:860 → 1038
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:51 → 113
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam12424
    Location:1083 → 1130
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
    pfam12710
    Location:647 → 786
    HAD; haloacid dehalogenase-like hydrolase
    pfam13246
    Location:506 → 595
    Cation_ATPase; Cation transport ATPase (P-type)

  11. XM_015348200.1 → XP_015203686.1  plasma membrane calcium-transporting ATPase 2 isoform X1

    UniProtKB/TrEMBL
    W5N924
    Conserved Domains (7) summary
    TIGR01517
    Location:12 → 1100
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam00122
    Location:193 → 501
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:916 → 1094
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:51 → 113
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam12424
    Location:1139 → 1186
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
    pfam12710
    Location:703 → 842
    HAD; haloacid dehalogenase-like hydrolase
    pfam13246
    Location:562 → 651
    Cation_ATPase; Cation transport ATPase (P-type)

  12. XM_006631014.2 → XP_006631077.1  plasma membrane calcium-transporting ATPase 2 isoform X1

    UniProtKB/TrEMBL
    W5N924
    Conserved Domains (7) summary
    TIGR01517
    Location:12 → 1100
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam00122
    Location:193 → 501
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:916 → 1094
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:51 → 113
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam12424
    Location:1139 → 1186
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
    pfam12710
    Location:703 → 842
    HAD; haloacid dehalogenase-like hydrolase
    pfam13246
    Location:562 → 651
    Cation_ATPase; Cation transport ATPase (P-type)
Nucleotide Protein
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