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itm2b integral membrane protein 2B [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102688931, updated on 2-Nov-2023

Summary

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Gene symbol
itm2b
Gene description
integral membrane protein 2B
See related
Ensembl:ENSLOCG00000010398
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
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Genomic context

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Location:
chromosome: LG17
Exon count:
6
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG17 NC_023195.1 (29198800..29215869, complement)

Linkage Group LG17 - NC_023195.1Genomic Context describing neighboring genes Neighboring gene ATPase copper transporting beta Neighboring gene ALG11 alpha-1,2-mannosyltransferase Neighboring gene NIMA related kinase 5 Neighboring gene nudix (nucleoside diphosphate linked moiety X)-type motif 15 Neighboring gene succinate-CoA ligase ADP-forming subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023195.1 Chromosome LG17 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amyloid-beta binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of amyloid precursor protein biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integral membrane protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023195.1 Reference LepOcu1 Primary Assembly

    Range
    29198800..29215869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006639203.2 → XP_006639266.1  integral membrane protein 2B

    UniProtKB/TrEMBL
    W5MWJ3
    Related
    ENSLOCP00000012752.1, ENSLOCT00000012776.1
    Conserved Domains (1) summary
    smart01039
    Location:129 → 223
    BRICHOS; The BRICHOS domain is found in a variety of proteins implicated in dementia, respiratory distress and cancer
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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