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tmc6b transmembrane channel-like 6b [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102688460, updated on 10-Mar-2024

Summary

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Gene symbol
tmc6b
Gene description
transmembrane channel-like 6b
See related
Ensembl:ENSLOCG00000012634
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Also known as
tmc6
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG10
Exon count:
24
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG10 NC_023188.1 (35976131..36005540, complement)

Linkage Group LG10 - NC_023188.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107078439 Neighboring gene uncharacterized LOC107078543 Neighboring gene transmembrane channel-like 8 Neighboring gene Fc receptor-like protein 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023188.1 Chromosome LG10 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mechanosensitive monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane channel-like protein 6
Names
transmembrane channel like 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023188.1 Reference LepOcu1 Primary Assembly

    Range
    35976131..36005540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015356432.1 → XP_015211918.1  transmembrane channel-like protein 6

    UniProtKB/TrEMBL
    W5N4K2
    Conserved Domains (1) summary
    pfam07810
    Location:580 → 677
    TMC; TMC domain

  2. XM_015356430.1 → XP_015211916.1  transmembrane channel-like protein 6

    UniProtKB/TrEMBL
    W5N4K2
    Conserved Domains (1) summary
    pfam07810
    Location:580 → 677
    TMC; TMC domain

  3. XM_015356431.1 → XP_015211917.1  transmembrane channel-like protein 6

    UniProtKB/TrEMBL
    W5N4K2
    Conserved Domains (1) summary
    pfam07810
    Location:580 → 677
    TMC; TMC domain

  4. XM_006635407.2 → XP_006635470.1  transmembrane channel-like protein 6

    UniProtKB/TrEMBL
    W5N4K2
    Related
    ENSLOCP00000015561.1, ENSLOCT00000015590.1
    Conserved Domains (1) summary
    pfam07810
    Location:580 → 677
    TMC; TMC domain
Nucleotide Protein
Heading Accession and Version

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