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osgepl1 O-sialoglycoprotein endopeptidase-like 1 [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102687849, updated on 10-Mar-2024

Summary

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Gene symbol
osgepl1
Gene description
O-sialoglycoprotein endopeptidase-like 1
See related
Ensembl:ENSLOCG00000008781
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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See osgepl1 in Genome Data Viewer
Location:
chromosome: LG12
Exon count:
7
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG12 NC_023190.1 (18977141..18982810, complement)

Linkage Group LG12 - NC_023190.1Genomic Context describing neighboring genes Neighboring gene asparagine synthetase domain containing 1 Neighboring gene uncharacterized LOC102687446 Neighboring gene ankyrin and armadillo repeat containing Neighboring gene adenosine deaminase tRNA specific 3 Neighboring gene ORMDL sphingolipid biosynthesis regulator 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023190.1 Chromosome LG12 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in tRNA threonylcarbamoyladenosine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023190.1 Reference LepOcu1 Primary Assembly

    Range
    18977141..18982810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015359197.1 → XP_015214683.1  probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    W5MQN2
    Related
    ENSLOCP00000010691.1, ENSLOCT00000010706.1
    Conserved Domains (2) summary
    TIGR03723
    Location:52 → 385
    T6A_TsaD_YgjD; tRNA threonylcarbamoyl adenosine modification protein TsaD
    cl22532
    Location:52 → 158
    Carbam_trans_N; Carbamoyltransferase N-terminus

  2. XM_015359198.1 → XP_015214684.1  probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial isoform X2

    Conserved Domains (2) summary
    TIGR03723
    Location:52 → 378
    T6A_TsaD_YgjD; tRNA threonylcarbamoyl adenosine modification protein TsaD
    cl22532
    Location:52 → 158
    Carbam_trans_N; Carbamoyltransferase N-terminus
Nucleotide Protein
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