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mthfsd methenyltetrahydrofolate synthetase domain containing [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102686448, updated on 10-Mar-2024

Summary

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Gene symbol
mthfsd
Gene description
methenyltetrahydrofolate synthetase domain containing
See related
Ensembl:ENSLOCG00000001066
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG23
Exon count:
10
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG23 NC_023201.1 (1439275..1443794, complement)

Linkage Group LG23 - NC_023201.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107079975 Neighboring gene forkhead box F1 Neighboring gene growth arrest-specific 8 Neighboring gene dysbindin domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023201.1 Chromosome LG23 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methenyltetrahydrofolate synthase domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023201.1 Reference LepOcu1 Primary Assembly

    Range
    1439275..1443794 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015368346.1 → XP_015223832.1  methenyltetrahydrofolate synthase domain-containing protein isoform X4

    UniProtKB/TrEMBL
    W5LYJ4
    Conserved Domains (2) summary
    cl00360
    Location:13 → 210
    5-FTHF_cyc-lig; 5-formyltetrahydrofolate cyclo-ligase family
    cl17169
    Location:328 → 399
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_015368343.1 → XP_015223829.1  methenyltetrahydrofolate synthase domain-containing protein isoform X1

    UniProtKB/TrEMBL
    W5LYJ4
    Related
    ENSLOCP00000001201.1, ENSLOCT00000001205.1
    Conserved Domains (3) summary
    pfam16626
    Location:273 → 343
    Papilin_u7; Linking region between Kunitz_BPTI and I-set on papilin
    cl00360
    Location:13 → 210
    5-FTHF_cyc-lig; 5-formyltetrahydrofolate cyclo-ligase family
    cl17169
    Location:346 → 417
    RRM_SF; RNA recognition motif (RRM) superfamily

  3. XM_015368344.1 → XP_015223830.1  methenyltetrahydrofolate synthase domain-containing protein isoform X2

    UniProtKB/TrEMBL
    W5LYJ4
    Conserved Domains (3) summary
    pfam16626
    Location:273 → 343
    Papilin_u7; Linking region between Kunitz_BPTI and I-set on papilin
    cl00360
    Location:13 → 210
    5-FTHF_cyc-lig; 5-formyltetrahydrofolate cyclo-ligase family
    cl17169
    Location:346 → 417
    RRM_SF; RNA recognition motif (RRM) superfamily

  4. XM_015368345.1 → XP_015223831.1  methenyltetrahydrofolate synthase domain-containing protein isoform X3

    UniProtKB/TrEMBL
    W5LYJ4
    Conserved Domains (3) summary
    pfam16626
    Location:273 → 343
    Papilin_u7; Linking region between Kunitz_BPTI and I-set on papilin
    cl00360
    Location:13 → 210
    5-FTHF_cyc-lig; 5-formyltetrahydrofolate cyclo-ligase family
    cl17169
    Location:346 → 417
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
Heading Accession and Version

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