U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC102617847 agamous-like MADS-box protein AGL80 [ Citrus sinensis (sweet orange) ]

Gene ID: 102617847, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC102617847
Gene description
agamous-like MADS-box protein AGL80
Locus tag
KPL70_016355
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 5 NC_068560.1 (35407837..35408496)
102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) 3 NC_023048.1 (25383517..25384050)

Chromosome 5 - NC_068560.1Genomic Context describing neighboring genes Neighboring gene transcription factor bHLH80 Neighboring gene altered inheritance rate of mitochondria protein 25 Neighboring gene uncharacterized LOC102618133 Neighboring gene FT-interacting protein 7-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
agamous-like MADS-box protein AGL80

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068560.1 Reference DVS_A1.0 Primary Assembly

    Range
    35407837..35408496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006473820.2 → XP_006473883.2  agamous-like MADS-box protein AGL80

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases