U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC102580381 transcription factor JUNGBRUNNEN 1 [ Solanum tuberosum (potato) ]

Gene ID: 102580381, updated on 2-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC102580381
Gene description
transcription factor JUNGBRUNNEN 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239000.1 (248300..249542)

NW_006239000.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein CONSTANS-LIKE 2 Neighboring gene molybdenum cofactor sulfurase Neighboring gene porphobilinogen deaminase, chloroplastic Neighboring gene protein Iojap, chloroplastic

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006239000.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor JUNGBRUNNEN 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239000.1 Reference SolTub_3.0 Primary Assembly

    Range
    248300..249542
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015308113.1 → XP_015163599.1  transcription factor JUNGBRUNNEN 1

    UniProtKB/TrEMBL
    M1DK55
    Conserved Domains (1) summary
    pfam02365
    Location:23 → 65
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases