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ZFHX4 zinc finger homeobox 4 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102573423, updated on 10-Mar-2024

Summary

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Gene symbol
ZFHX4
Gene description
zinc finger homeobox 4
Locus tag
Y1Q_0003734
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 3 NC_081826.1 (56502997..56681252, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017713071.1 (3349196..3527857, complement)

Chromosome 3 - NC_081826.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106738322 Neighboring gene uncharacterized LOC109285974 Neighboring gene peroxisomal biogenesis factor 2 Neighboring gene uncharacterized LOC109285973 Neighboring gene uncharacterized LOC109285939 Neighboring gene hepatocyte nuclear factor 4 gamma

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger homeobox protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081826.1 Reference rAllMis1 Primary Assembly

    Range
    56502997..56681252 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019498613.2 → XP_019354158.1  zinc finger homeobox protein 4 isoform X2

  2. XM_019498614.2 → XP_019354159.1  zinc finger homeobox protein 4 isoform X3

  3. XM_019498611.2 → XP_019354156.1  zinc finger homeobox protein 4 isoform X1

  4. XM_019498612.2 → XP_019354157.1  zinc finger homeobox protein 4 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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