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CHRDL1 chordin like 1 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102572843, updated on 10-Mar-2024

Summary

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Gene symbol
CHRDL1
Gene description
chordin like 1
Locus tag
Y1Q_0015552
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See CHRDL1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 8 NC_081831.1 (67497084..67554715)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017709938.1 (6194126..6251807, complement)

Chromosome 8 - NC_081831.1Genomic Context describing neighboring genes Neighboring gene p21 (RAC1) activated kinase 3 Neighboring gene uncharacterized LOC132252168 Neighboring gene uncharacterized LOC109283246 Neighboring gene AMMECR nuclear protein 1 Neighboring gene transmembrane protein 164 Neighboring gene uncharacterized LOC132252169

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chordin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081831.1 Reference rAllMis1 Primary Assembly

    Range
    67497084..67554715
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019487810.2 → XP_019343355.1  chordin-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A151NN64

  2. XM_014607202.3 → XP_014462688.1  chordin-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A151NN64
    Conserved Domains (1) summary
    cl17735
    Location:117 → 180
    VWC; von Willebrand factor type C domain

  3. XM_019487816.2 → XP_019343361.1  chordin-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A151NN64

  4. XM_059732812.1 → XP_059588795.1  chordin-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A151NP98

  5. XM_019487812.2 → XP_019343357.1  chordin-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A151NN64

  6. XM_019487814.2 → XP_019343359.1  chordin-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A151NN64

  7. XM_019487817.2 → XP_019343362.1  chordin-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A151NN64
Nucleotide Protein
Heading Accession and Version

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