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PLA2G12A phospholipase A2 group XIIA [ Alligator mississippiensis (American alligator) ]

Gene ID: 102572276, updated on 10-Mar-2024

Summary

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Gene symbol
PLA2G12A
Gene description
phospholipase A2 group XIIA
Locus tag
Y1Q_0002053
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See PLA2G12A in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 2 NC_081825.1 (128142607..128151520)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017713485.1 (2266886..2275789)

Chromosome 2 - NC_081825.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106738671 Neighboring gene complement factor I Neighboring gene caspase 6 Neighboring gene mitochondrial calcium uniporter dominant negative subunit beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arachidonic acid secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
group XIIA secretory phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081825.1 Reference rAllMis1 Primary Assembly

    Range
    128142607..128151520
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006275634.4 → XP_006275696.1  group XIIA secretory phospholipase A2

    UniProtKB/TrEMBL
    A0A151MIR4
    Conserved Domains (1) summary
    pfam06951
    Location:24 → 185
    PLA2G12; Group XII secretory phospholipase A2 precursor (PLA2G12)
Nucleotide Protein
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