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ZFAND2A zinc finger AN1-type containing 2A [ Alligator mississippiensis (American alligator) ]

Gene ID: 102568813, updated on 10-Mar-2024

Summary

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Gene symbol
ZFAND2A
Gene description
zinc finger AN1-type containing 2A
Locus tag
Y1Q_0008306
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 13 NC_081836.1 (49948443..49953786, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711568.1 (14890413..14895060, complement)

Chromosome 13 - NC_081836.1Genomic Context describing neighboring genes Neighboring gene chromosome 13 C7orf50 homolog Neighboring gene G protein-coupled receptor 146 Neighboring gene G protein-coupled estrogen receptor 1 Neighboring gene uncharacterized LOC132244621 Neighboring gene UNC homeobox

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to ER IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AN1-type zinc finger protein 2A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081836.1 Reference rAllMis1 Primary Assembly

    Range
    49948443..49953786 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059716414.1 → XP_059572397.1  AN1-type zinc finger protein 2A isoform X4

  2. XM_014610739.3 → XP_014466225.1  AN1-type zinc finger protein 2A isoform X1

    UniProtKB/TrEMBL
    A0A151N1M9
    Conserved Domains (1) summary
    pfam01428
    Location:100 → 136
    zf-AN1; AN1-like Zinc finger

  3. XM_014610740.3 → XP_014466226.1  AN1-type zinc finger protein 2A isoform X2

    Conserved Domains (1) summary
    pfam01428
    Location:100 → 136
    zf-AN1; AN1-like Zinc finger

  4. XM_006278251.4 → XP_006278313.2  AN1-type zinc finger protein 2A isoform X3

    Conserved Domains (1) summary
    pfam01428
    Location:100 → 136
    zf-AN1; AN1-like Zinc finger
Nucleotide Protein
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