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COG3 component of oligomeric golgi complex 3 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102567564, updated on 10-Mar-2024

Summary

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Gene symbol
COG3
Gene description
component of oligomeric golgi complex 3
Locus tag
Y1Q_0004598
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See COG3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 1 NC_081824.1 (411261174..411315049)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017713569.1 (3147762..3202377, complement)

Chromosome 1 - NC_081824.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA31 Neighboring gene tumor protein, translationally-controlled 1 Neighboring gene solute carrier family 25 member 30 Neighboring gene glutamate rich 6B Neighboring gene chibby family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cis-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081824.1 Reference rAllMis1 Primary Assembly

    Range
    411261174..411315049
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019500456.2 → XP_019356001.1  conserved oligomeric Golgi complex subunit 3 isoform X2

  2. XM_014608329.3 → XP_014463815.1  conserved oligomeric Golgi complex subunit 3 isoform X1

    UniProtKB/TrEMBL
    A0A151MHK3
    Conserved Domains (1) summary
    pfam04136
    Location:126 → 269
    Sec34; Sec34-like family
Nucleotide Protein
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