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MTMR3 myotubularin related protein 3 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102565909, updated on 3-Apr-2024

Summary

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Gene symbol
MTMR3
Gene description
myotubularin related protein 3
Locus tag
Y1Q_0022873
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 10 NC_081833.1 (27197469..27405729)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711467.1 (8841365..9041484)

Chromosome 10 - NC_081833.1Genomic Context describing neighboring genes Neighboring gene cytochrome b-c1 complex subunit 9 Neighboring gene activating signal cointegrator 1 complex subunit 2 Neighboring gene acyl-CoA dehydrogenase family member 11 Neighboring gene HORMA domain containing 2 Neighboring gene LIF interleukin 6 family cytokine

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin-related protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081833.1 Reference rAllMis1 Primary Assembly

    Range
    27197469..27405729
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059713592.1 → XP_059569575.1  myotubularin-related protein 3 isoform X1

  2. XM_019493674.2 → XP_019349219.1  myotubularin-related protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A151N5D2

  3. XM_019493673.2 → XP_019349218.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A151N5D2

  4. XM_006268932.4 → XP_006268994.1  myotubularin-related protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A151N5D2
    Conserved Domains (3) summary
    cd15732
    Location:1121 → 1181
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    pfam06602
    Location:127 → 523
    Myotub-related; Myotubularin-like phosphatase domain
    cl17171
    Location:23 → 136
    PH-like; Pleckstrin homology-like domain

  5. XM_019493675.2 → XP_019349220.1  myotubularin-related protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A151N5D2
Nucleotide Protein
Heading Accession and Version

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