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ALKBH7 alkB homolog 7 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102563500, updated on 10-Mar-2024

Summary

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Gene symbol
ALKBH7
Gene description
alkB homolog 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 8 NC_081831.1 (23353147..23354901)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017709389.1 (448074..449772, complement)

Chromosome 8 - NC_081831.1Genomic Context describing neighboring genes Neighboring gene caseinolytic mitochondrial matrix peptidase proteolytic subunit Neighboring gene afadin- and alpha-actinin-binding protein Neighboring gene persephin Neighboring gene general transcription factor IIF subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA damage response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial
Names
alkB, alkylation repair homolog 7
alkB, alkylation repair-like protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081831.1 Reference rAllMis1 Primary Assembly

    Range
    23353147..23354901
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006265608.4 → XP_006265670.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial

    Conserved Domains (1) summary
    cl21496
    Location:28 → 191
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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