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LOC102563459 ALF transcription elongation factor 3 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102563459, updated on 23-Oct-2023

Summary

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Gene symbol
LOC102563459
Gene description
ALF transcription elongation factor 3
Locus tag
Y1Q_0006240
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Also known as
AFF3
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Genomic context

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Location:
chromosome: 1
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 1 NC_081824.1 (343348612..343600657, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017709042.1 (15553058..16132879)

Chromosome 1 - NC_081824.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 5B Neighboring gene REV1 DNA directed polymerase Neighboring gene uncharacterized LOC132247764 Neighboring gene AF4/FMR2 family member 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of super elongation complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AF4/FMR2 family member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081824.1 Reference rAllMis1 Primary Assembly

    Range
    343348612..343600657 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059720988.1 → XP_059576971.1  AF4/FMR2 family member 3 isoform X2

  2. XM_059720987.1 → XP_059576970.1  AF4/FMR2 family member 3 isoform X1

  3. XM_059720990.1 → XP_059576973.1  AF4/FMR2 family member 3 isoform X4

  4. XM_059720989.1 → XP_059576972.1  AF4/FMR2 family member 3 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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