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FAM149A family with sequence similarity 149 member A [ Alligator mississippiensis (American alligator) ]

Gene ID: 102562769, updated on 3-Apr-2024

Summary

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Gene symbol
FAM149A
Gene description
family with sequence similarity 149 member A
Locus tag
Y1Q_0021664
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 2 NC_081825.1 (69649402..69723304, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017707947.1 (53438141..53504572, complement)

Chromosome 2 - NC_081825.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 4V2 Neighboring gene cytochrome P450 4V2 Neighboring gene toll like receptor 3 Neighboring gene uncharacterized LOC109281603

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protein FAM149A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081825.1 Reference rAllMis1 Primary Assembly

    Range
    69649402..69723304 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019481315.2 → XP_019336860.2  protein FAM149A isoform X1

  2. XM_059721816.1 → XP_059577799.1  protein FAM149A isoform X3

  3. XM_014594862.3 → XP_014450348.1  protein FAM149A isoform X2

    Conserved Domains (2) summary
    pfam12516
    Location:2 → 64
    DUF3719; Protein of unknown function (DUF3719)
    cl21572
    Location:120 → 209
    GatB_Yqey; GatB domain

  4. XM_019481318.2 → XP_019336863.1  protein FAM149A isoform X2

  5. XM_014594863.3 → XP_014450349.2  protein FAM149A isoform X4

    UniProtKB/TrEMBL
    A0A151PAG9, A0A151PAN0

  6. XM_019481316.2 → XP_019336861.1  protein FAM149A isoform X5

    UniProtKB/TrEMBL
    A0A151PAN0, A0A151PAT5
Nucleotide Protein
Heading Accession and Version

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