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KATNAL2 katanin catalytic subunit A1 like 2 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102562239, updated on 10-Mar-2024

Summary

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Gene symbol
KATNAL2
Gene description
katanin catalytic subunit A1 like 2
Locus tag
Y1Q_0009724
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 3 NC_081826.1 (290892372..290937567, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017712138.1 (7725675..7770393)

Chromosome 3 - NC_081826.1Genomic Context describing neighboring genes Neighboring gene immediate early response 3 interacting protein 1 Neighboring gene haloacid dehalogenase like hydrolase domain containing 2 Neighboring gene protein inhibitor of activated STAT 2 Neighboring gene elongation factor 2 Neighboring gene zinc finger BED domain-containing protein 4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
katanin p60 ATPase-containing subunit A-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081826.1 Reference rAllMis1 Primary Assembly

    Range
    290892372..290937567 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059725292.1 → XP_059581275.1  katanin p60 ATPase-containing subunit A-like 2 isoform X7

  2. XM_019495942.2 → XP_019351487.2  katanin p60 ATPase-containing subunit A-like 2 isoform X3

  3. XM_059725291.1 → XP_059581274.1  katanin p60 ATPase-containing subunit A-like 2 isoform X5

  4. XM_059725289.1 → XP_059581272.1  katanin p60 ATPase-containing subunit A-like 2 isoform X2

  5. XM_059725290.1 → XP_059581273.1  katanin p60 ATPase-containing subunit A-like 2 isoform X4

  6. XM_006263333.4 → XP_006263395.3  katanin p60 ATPase-containing subunit A-like 2 isoform X1

  7. XM_019495944.2 → XP_019351489.2  katanin p60 ATPase-containing subunit A-like 2 isoform X6

  8. XM_059725293.1 → XP_059581276.1  katanin p60 ATPase-containing subunit A-like 2 isoform X8

Nucleotide Protein
Heading Accession and Version

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