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OSGEP O-sialoglycoprotein endopeptidase [ Alligator mississippiensis (American alligator) ]

Gene ID: 102562009, updated on 10-Mar-2024

Summary

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Gene symbol
OSGEP
Gene description
O-sialoglycoprotein endopeptidase
Locus tag
Y1Q_0005027
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 7 NC_081830.1 (3073406..3077186, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017714154.1 (148937..152833, complement)

Chromosome 7 - NC_081830.1Genomic Context describing neighboring genes Neighboring gene kelch like family member 33 Neighboring gene solute carrier family 12 member 3 Neighboring gene uncharacterized LOC109281129 Neighboring gene apurinic/apyrimidinic endodeoxyribonuclease 1 Neighboring gene phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in tRNA threonylcarbamoyladenosine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of EKC/KEOPS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA N6-adenosine threonylcarbamoyltransferase
Names
putative tRNA N6-adenosine threonylcarbamoyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081830.1 Reference rAllMis1 Primary Assembly

    Range
    3073406..3077186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006266573.4 → XP_006266635.2  tRNA N6-adenosine threonylcarbamoyltransferase isoform X1

    Conserved Domains (1) summary
    PTZ00340
    Location:4 → 335
    PTZ00340; O-sialoglycoprotein endopeptidase-like protein; Provisional

  2. XM_019479454.2 → XP_019334999.1  tRNA N6-adenosine threonylcarbamoyltransferase isoform X2

RNA

  1. XR_002087684.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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