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SULF2 sulfatase 2 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102561994, updated on 3-Apr-2024

Summary

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Gene symbol
SULF2
Gene description
sulfatase 2
Locus tag
Y1Q_0002762
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Also known as
SULF1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 9 NC_081832.1 (14899038..15155220)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017708899.1 (11279855..11532859)

Chromosome 9 - NC_081832.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109282464 Neighboring gene uncharacterized LOC132243372 Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene nuclear receptor coactivator 3 Neighboring gene translocating chain-associated membrane protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine-6-sulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycosaminoglycan binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extracellular sulfatase Sulf-2
Names
extracellular sulfatase Sulf-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081832.1 Reference rAllMis1 Primary Assembly

    Range
    14899038..15155220
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014609699.3 → XP_014465185.1  extracellular sulfatase Sulf-2 isoform X1

    UniProtKB/TrEMBL
    A0A151NZ12
    Conserved Domains (4) summary
    COG3119
    Location:43 → 387
    AslA; Arylsulfatase A or related enzyme [Inorganic ion transport and metabolism]
    pfam12548
    Location:539 → 670
    DUF3740; Sulfatase protein
    cd16147
    Location:43 → 385
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    cl23718
    Location:758 → 807
    ALP_like; alkaline phosphatases and sulfatases

  2. XM_059733171.1 → XP_059589154.1  extracellular sulfatase Sulf-2 isoform X1

  3. XM_059733170.1 → XP_059589153.1  extracellular sulfatase Sulf-2 isoform X1

  4. XM_014609700.3 → XP_014465186.1  extracellular sulfatase Sulf-2 isoform X2

    UniProtKB/TrEMBL
    A0A151NZ12
    Conserved Domains (4) summary
    COG3119
    Location:9 → 327
    AslA; Arylsulfatase A or related enzyme [Inorganic ion transport and metabolism]
    pfam12548
    Location:479 → 610
    DUF3740; Sulfatase protein
    cd16147
    Location:1 → 325
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    cl23718
    Location:698 → 747
    ALP_like; alkaline phosphatases and sulfatases
Nucleotide Protein
Heading Accession and Version

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