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MYRIP myosin VIIA and Rab interacting protein [ Alligator mississippiensis (American alligator) ]

Gene ID: 102561597, updated on 10-Mar-2024

Summary

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Gene symbol
MYRIP
Gene description
myosin VIIA and Rab interacting protein
Locus tag
Y1Q_0017592
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See MYRIP in Genome Data Viewer
Location:
chromosome: 5
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 5 NC_081828.1 (134554112..134973840)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017708624.1 (27098567..27486093)

Chromosome 5 - NC_081828.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109282243 Neighboring gene transmembrane channel like 2 Neighboring gene uncharacterized LOC109282245 Neighboring gene protein NYNRIN-like Neighboring gene uncharacterized LOC102561138 Neighboring gene eukaryotic translation initiation factor 1B Neighboring gene cholecystokinin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables myosin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rab effector MyRIP

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081828.1 Reference rAllMis1 Primary Assembly

    Range
    134554112..134973840
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019483500.2 → XP_019339045.1  rab effector MyRIP isoform X2

  2. XM_014602610.3 → XP_014458096.2  rab effector MyRIP isoform X1

    UniProtKB/TrEMBL
    A0A151P2M5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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