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MRPS27 mitochondrial ribosomal protein S27 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102561039, updated on 10-Mar-2024

Summary

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Gene symbol
MRPS27
Gene description
mitochondrial ribosomal protein S27
Locus tag
Y1Q_0004021
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 3 NC_081826.1 (251921516..251993855, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017707593.1 (6213758..6280771)

Chromosome 3 - NC_081826.1Genomic Context describing neighboring genes Neighboring gene endogenous retroviral envelope protein HEMO-like Neighboring gene microtubule associated protein 1B Neighboring gene uncharacterized LOC132249602 Neighboring gene uncharacterized LOC106738548 Neighboring gene zinc finger protein 366 Neighboring gene transportin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small ribosomal subunit protein mS27
Names
28S ribosomal protein S27, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081826.1 Reference rAllMis1 Primary Assembly

    Range
    251921516..251993855 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014594484.3 → XP_014449970.1  small ribosomal subunit protein mS27 isoform X2

    UniProtKB/TrEMBL
    A0A151PHY9
    Conserved Domains (3) summary
    sd00004
    Location:85 → 112
    PPR; PPR repeat [structural motif]
    pfam10037
    Location:1 → 355
    MRP-S27; Mitochondrial 28S ribosomal protein S27
    pfam14235
    Location:295 → 357
    DUF4337; Domain of unknown function (DUF4337)

  2. XM_006274635.4 → XP_006274697.1  small ribosomal subunit protein mS27 isoform X1

    UniProtKB/TrEMBL
    A0A151PHY9
    Conserved Domains (3) summary
    sd00004
    Location:141 → 168
    PPR; PPR repeat [structural motif]
    pfam10037
    Location:1 → 411
    MRP-S27; Mitochondrial 28S ribosomal protein S27
    pfam14235
    Location:351 → 413
    DUF4337; Domain of unknown function (DUF4337)
Nucleotide Protein
Heading Accession and Version

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